Skip to main content

News & Events

Events Calendar

Transcriptome Analysis Workshop

UMB, SOM, Institute for Genome Sciences
UMB Health Sciences Facility, Bldg. 3
670 W. Baltimore St.
Baltimore  Maryland  21201
United States
12:30pm to 10:15am

This workshop will provide training on the tools used for analysis of RNA-Seq data. Methods covered include: mapping reads to a reference and differential expression analysis.

Included topics

  • QC considerations
  • Read alignment with Bowtie, TopHat, and HISat
  • Differential expression with DEseq
  • Isoform analysis with Cufflinks
  • Differential Isoform analysis with CuffDiff
  • Pathway Analysis with IPA, GOrilla, and DAVID
  • De-novo Transcriptomics using Trinity

This workshop is 2.5 days long. They will begin in the afternoon of the first day with registration/check-in from 12:30 to 1:00. The workshop will run from 1:00-5:00 the first day and from 9:00-5:00 the remaining two days. Breakfast and lunch will be provided on the second and third days (the two full days). Click here for more information.


The registration fee for this workshop is $450 for general rate, $350 for student rate.